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Joint Beamforming and Feature Detection for Enhanced Visualization of Spinal Bone Surfaces in Ultrasound Images

Saeed Mehdizadeh, Sebastien Muller, Gabriel Kiss, Tonni F. Johansen, and Sverre Holm S. Mehdizadeh, was with the Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway and is now with Cowi AS, Oslo.S. Muller is with the Department of Medical Technology, SINTEF, Norway.G. Kiss is with with the Department of Circulation and Medical Imaging, NTNU, and St. Olavs Hospital, Trondheim, Norway. Tonni F. Johansen in with the Department of Circulation and Medical Imaging, NTNU, and SINTEF ICT Trondheim, Norway.S. Holm is with the Department of Informatics, University of Oslo, Norway.
Abstract

We propose a framework for extracting the bone surface from B-mode images employing the eigen-space minimum variance (ESMV) beamformer and a ridge detection method. We show that an ESMV beamformer with a rank-1 signal subspace can preserve the bone anatomy and enhance the edges, despite an image which is less visually appealing due to some speckle pattern distortion. The beamformed images are post-processed using the phase symmetry (PS) technique. We validate this framework by registering the ultrasound images of a vertebra (in a water bath) against the corresponding Computed Tomography (CT) dataset. The results show a bone localization error in the same order of magnitude as the standard delay-and-sum (DAS) technique, but with approximately 20%\% smaller standard deviation (STD) of the image intensity distribution around the bone surface. This indicates a sharper bone surface detection. Further, the noise level inside the bone shadow is reduced by 60%\%. In in-vivo experiments, this framework is used for imaging the spinal anatomy. We show that PS images obtained from this beamformer setup have sharper bone boundaries in comparison with the standard DAS ones, and they are reasonably well separated from the surrounding soft tissue.

I Introduction

The imaging of bone structures is usually done using X-ray or Computed Tomography (CT). However, ionizing radiation, scanner time cost, and lack of portability are the limitations of these modalities. Ultrasound may address these issues in many applications. Ultrasound imaging of bone tissue has been investigated in different clinical procedures, e.g., registration of bone in neurosurgeries and orthopedics [1, 2], guidance for diagnosis of skeletal fractures in emergency rooms [3], and pain management interventions [4, 5]. Particularly, in some applications, dealing with the spine is of interest, e.g. guidance for minimal invasive (MI) procedures in spinal surgery [6, 7], and for administration of spinal anesthesia [8, 9, 10, 11].

Ultrasound imaging is a valuable modality for enhancing the safety of different puncture techniques in regional anesthesia [11, 10]. These procedures are mostly performed landmark based or blind [10]. Ultrasound can facilitate these routines by visualizing the spinal anatomy, assisting to locate the puncture region before performing the injection procedure. Further, ultrasound can be used as a real-time modality for needle trajectory control, or more effective placement of medication [11]. However, in epidural injections, the spinal structures obstruct the ultrasound beams and makes the images noisy.
Another potential application of ultrasound is computer-assisted minimally invasive (MI) spinal surgery [2]. The procedure may require the registration of the patient positioned for surgery with preoperatively acquired images. The restriction of minimal invasiveness, together with limited radiation exposure, point at ultrasound imaging as a good candidate [2]. The other important procedure in MI spine surgery is the accurate localization of the target vertebra. Conventionally, localizing a vertebral level is performed by manual palpation and direct fluoroscopy. Thus, surgeons identify a specific anatomical landmark such as the sacrum, and, then, start counting under fluoroscopic control up to the targeted vertebral level [12]. This approach exposes the patient to an undesirable level of radiation, and is prone to counting errors due to the similar appearance of vertebrae in projection images [12]. Alternatively, ultrasound can improve patient safety and decrease the risk of wrong level surgery [12].
In general, bone imaging using conventional ultrasound techniques is prone to higher level of artifacts in comparison with soft tissue imaging [13, 9]. In the case of the spine, images are filled with acoustical noise, and artifacts that can impede visualization of important features, and also make it hard to detect and segment the bone structure. Image enhancement, where bone structures stand out more distinctly from surrounding soft tissue, helps to isolate the bone surface out of the B-mode ultrasound.
To automate segmentation of the bone structure, image intensity or gradient-based methods are common [14], but results are sensitive to the parameters of image acquisition, e.g. frequency and dynamic range. Pattern recognition or statistical shape models provide more robust results but require learning sets, and fail to identify traumatic cases as the pattern searched for is disrupted [15].
The visual interpretation of images is strongly related to the phase of the underlying signal [16]. Such that the image features (e.g. edges, corners, etc.) occur at parts of the image where the Fourier components are maximally in phase with one another [16]. Based on local phase information, a research group [17] has presented a robust method for bone surface detection. They use 2-D Log-Gabor filters to derive the phase symmetry (PS) measure a ridge detector for bone localization and automatic segmentation of bone surfaces in ultrasound images. This technique detects the major axis of symmetry of the signals, and its performance may degrade with the performance of the reconstruction method.
In standard medical ultrasound the images are reconstructed based on the DAS beamforming technique. In this technique received signals from active channels are dynamically delayed and summed in the beamformer. In this case, the achievable resolution, sidelobes level and contrast are limited. Instead, using an adaptive method, such as minimum variance (MV) based beamforming techniques, can enhance the image quality as a result of lower sidelobes, a narrower beamwidth, and superior definition of edges [18]. In the MV approach, for each time sample, the delayed received signal from each element is weighted adaptively before summing up in the beamformer. This approach was initially developed by Capon for passive narrow-band applications [19].
Several researchers have previously investigated the MV approach in medical ultrasound. They have reported appreciable enhancements in the resolution and contrast in comparison with DAS beamforming [20, 21, 18, 22]. Further, in a simulation study [22] an eigenspace-based MV (ESMV) technique has been employed in order to improve the contrast of the MV beamforming in medical ultrasound imaging. This technique has been developed based on earlier studies in radar imaging [23, 24]. Previous work by our group [25] has demonstrated that in bone imaging scenarios, the robustness of the MV beamformer degrades due to a poor estimation of the covariance matrix. The forward backward (FB) averaging technique has been proposed in order to enhance the covariance matrix estimation against signal misalignment due to the shadowing [26]. More recently, we have investigated the potential of an ESMV beamforming technique to enhance the edges of the acoustically hard tissues [27]. We have also shown that by reducing the signal subspace rank the bone edges are improved [27]. Since the rank estimation is a challenge in ESMV beamformers, in this study we show that the use of a rank one signal subspace can reasonably well preserve the vertebra anatomy and enhance the bone edges in spinal imaging. The constructed images may be less appealing from a visual perspective, but the goal here is to achieve advantages for post-processing methods such as phase symmetry. In simulation, in-vitro, and in-vivo studies, we demonstrate that the extracted surfaces from the rank-1 ESMV images are sharper, and the anatomy of the spine is better defined in comparison with their corresponding DAS images.
The rest of this paper is organized as follows: in the next section, we first review the beamformer techniques, and the phase symmetry ridge detection method that are employed in this study; then, simulation and experimental setups are introduced. We present the results from simulated data of a point scatterer and vertebra phantoms, followed by results from CT-US registration of a vertebra phantom, and in-vivo images of the spine. This section is followed by the discussion on the results.

II methods

II-A Minimum variance beamformer

The minimum variance beamformer employs an element weight vector which minimizes the variance of the beamformer output under the constraint that the signal arriving from a point of interest is unaffected by the beamformer. In this method, the optimized weights are estimated as:

𝐰=𝐑1𝐚𝐚H𝐑1𝐚,{{\bf{w}}}=\frac{{{{{\bf{R}}}^{-1}}{\bf{a}}}}{{{{\bf{a}}^{H}}{{{\bf{R}}}^{-1}}\,{\bf{a}}}}, (1)

where R is the spatial covariance matrix, a is the steering vector, and (.)H(.)^{H} stands for Hermitian transpose. A common estimator for the data covariance matrix is the sample covariance matrix. Therefore, using a method called subarray technique [18], the sample covariance matrix is estimated as:

𝐑^=1(2K+1)(ML+1)k=KKl=1ML+1𝐗¯l[nk]𝐗¯l[nk]H,{\bf{\hat{R}}}=\frac{1}{{({2K+1})(M-L+1)}}\cdot\sum\limits_{{k=-K}}^{K}{\sum\limits_{{l}=1}^{M-L+1}{{{{\bf{\bar{X}}}}_{l}}[{n-k}]\,{{{\bf{\bar{X}}}}_{l}}{{[{n-k}]}^{H}}}}, (2)

where

𝐗¯l[n]=[xl[n]xl+1[n]xl+L1[n]]T.{{\bf{\bar{X}}}_{l}}[n]={\left[{\begin{array}[]{*{20}{c}}{{{x}_{l}}[n]}&{{{x}_{{l}+1}}[{n}]}&\ldots&{{{x}_{{l}+L-1}}[{n}]}\\ \end{array}}\right]^{T}.}

The sample covariance matrix has dimension, LL, the subarray length, xm[n]x_{m}[n] is a time sampled signal from element mm of a uniformly spaced linear array with MM elements, and (.)T(.)^{T} is transpose operator. In general, there is a time averaging over index kk which has been found to be necessary in order to get proper speckle statistics in the image [18]. The subarray technique can be combined with forward-backward averaging to improve the covariance matrix estimation [27]. The new estimate is expressed as:

𝐑^FB=12(𝐑^+𝐉𝐑^𝐉),{{\bf{\hat{R}}}_{FB}=\frac{1}{2}({\bf{\hat{R}}}+{\bf{J}}{{\bf{\hat{R}}}^{*}}{\bf{J}}),} (3)

where J is an exchange matrix, the left/right flipped version of the identity matrix, with the same dimension as 𝐑^\bf\hat{R} , and 𝐑^\bf\hat{R}^{*} denotes the complex conjugate of 𝐑^\bf\hat{R} . Substituting 𝐑{\bf R} with either 𝐑^{\bf\hat{R}} or 𝐑^FB{{\bf\hat{R}}_{FB}} in (1), the beamformer output is obtained as a coherent average over subarrays by:

z^[n]=1ML+1l=1ML+1𝐰H𝐗¯l[n],{\hat{z}}[n]=\frac{1}{M-L+1}\sum\limits_{l=1}^{M-L+1}{{{\bf{w}}^{H}}}{{{\bf{\bar{X}}}}_{l}}[n], (4)

where, 𝐰\bf w is a vector of time varying complex weights of size LL. Also, in order to enhance the robustness of the MV estimate a term, Δ/Ltr{𝐑}\Delta/{L}\cdot tr\left\{{\bf{R}}\right\} , is added to the diagonal of the covariance matrix before evaluating (1[28]. There are many details about MV beamforming algorithms applied to medical ultrasound imaging, which have been addressed in previous publications [20, 21, 18, 22]. In this paper we use the method that is described in [18].

II-B Eigenspace-Based beamformer

The eigenspace-based beamformer (ESMV) utilizes the eigen structure of the covariance matrix to estimate MV weights [24, 29]. With assumption of jLj\leq L , the sample covariance matrix 𝐑^{\bf\hat{R}} defined by (2) is eigendecomposed as:

𝐑^=𝐄𝚲𝐄H=𝐄s𝚲s𝐄sH+𝐄N𝚲N𝐄NH,{\bf{\hat{R}}}={\bf{E\Lambda E}}^{H}={{\bf{E}}_{s}}{{\bf{\Lambda}}_{s}}{\bf{E}}_{s}^{H}+\,{{\bf{E}}_{N}}{{\bf{\Lambda}}_{N}}{\bf{E}}_{N}^{H}, (5)

where

𝐄s=[𝐞1,,𝐞j],𝐄N=[𝐞j+1,,𝐞L],𝚲s=𝑑𝑖𝑎𝑔[λ1,,λj],𝚲N=𝑑𝑖𝑎𝑔[λj+1,,λL],\begin{split}&{\bf{E}_{\rm{s}}}=[{{\bf{e}}_{1}},...,{{\bf{e}}_{\it j}}],\,\,\,\,\,\,\,\,\,\,\,\,\,\,{\bf{E}_{\rm{N}}}=[{{\bf{e}}_{{\it j}+1}},...,{{\bf{e}}_{{\it L}}}],\\ &{\bf{\Lambda}_{\rm{s}}}={\it diag}[{\it{\lambda_{\rm 1}},...,{\lambda_{j}}}],\,\,{{\bf{\Lambda}_{\rm{N}}}}={\it diag}[{\it{\lambda_{j+{\rm 1}}},...,{\lambda_{L}}}],\end{split} (6)

and, λ1λ2.λL{{\lambda_{1}}\geq{\lambda_{2}}\geq....\geq{\lambda_{L}}} are eigenvalues in descending order, and 𝐞l{\bf{e}}_{l}, l=1,,L\it l={\rm{1}},...,L are the corresponding orthonormal eigenvectors. We refer to the subspace spanned by the columns of 𝐄s{\bf{E}}_{s} as the signal subspace and to that of 𝐄N{\bf{E}}_{N} as the noise subspace. Ideally, the direction of the steering vector and the noise subspace are orthogonal, i.e. 𝐄NH𝐚=0{\bf{E}}_{N}^{H}{\bf{a}}=0 [29]. This will result in a weight vector as [27, 24]:

𝐰p=𝐄s𝐄sH𝐰.{{{\bf{w}}_{p}}={{\bf{E}}_{s}}{\bf{E}}_{s}^{H}{\bf{w}}.} (7)

Equation 7 can be interpreted as the projection of 𝐰\bf w on the signal subspace of 𝐑^{\bf\hat{R}} [24]. We select the rank of the signal subspace employing the cross-spectral metric [30]. The output signal power of the minimum variance beamformer can be expressed based on the cross-spectral metric as given in chapter 6.8.2 of [30].

σz2=(𝐚H𝐄𝚲𝟏𝐄H𝐚)1=(k=1Lρk2λk)1,ρ=𝐄H𝐚,{{\sigma^{2}_{z}}=({{\bf{a}}^{H}}{\bf{E}}{\bf{\Lambda}^{-1}}{{\bf{E}}^{H}}{\bf{a}})^{-1}=(\sum\limits_{k=1}^{L}{\frac{{\rho_{k}^{2}}}{{{\lambda_{k}}}}})^{-1},\,\,\rho={{\bf{E}}^{H}}{\bf{a}},} (8)

where ρk2/λk{{{\rho_{k}^{2}}\mathord{\left/{\vphantom{{\rho_{k}^{2}}{{\lambda_{k}}}}}\right.\kern-1.2pt}{{\lambda_{k}}}}} is the cross-spectral metric for the kthk^{th} eigenvalue. We select the rank of 𝐄s{\bf{E}}_{s} by identifying the jj largest eigenvalues for which the sum of their cross-spectral metric is β\beta times smaller than the total output signal power (σz2{\sigma^{2}_{z}}[27].

II-C Ridge detection

The images were obtained from different beamforming techniques using Matlab (the Mathworks, Natick, MA, U.S), and resampled to 512×512512\times 512 isotropic pixels to form the basis for further image processing by phase symmetry filtering. We also implemented the phase symmetry algorithm in Matlab. A log-Gabor filter was defined in polar coordinates as the product of a radial factor by an angular factor:

f(r,θ)=exp[12(log(rr0)log(σrr0))2]exp[12(α(θ,θ0)σα)2],f(r,\theta)=\exp\left[{-\frac{1}{2}\cdot{{\left({\frac{{\log(\frac{r}{{{r_{0}}}})}}{{\log(\frac{{{\sigma_{r}}}}{{{r_{0}}}})}}}\right)}^{2}}}\right]\cdot\exp\left[{-\frac{1}{2}\cdot{{\left({\frac{{\alpha(\theta,{\theta_{0}})}}{{{\sigma_{\alpha}}}}}\right)}^{2}}}\right], (9)

where rr and θ\theta are the coordinates in the Fourier-transformed image, r0r_{0} the characteristic radius, and σr\sigma_{r} the radial standard deviation. For the radial part, we choose empirically σr/r0\sigma_{r}/r_{0} as 0.15 . The angular factor α(θ,θ0)\alpha(\theta,\theta_{0}), shows the angle between the position vector and the direction of the filter, and σα\sigma_{\alpha} is angular standard deviation that is assumed to be π/6\pi/6 in this study. The two-dimensional Fast Fourier Transform (F)(F) of the image is multiplied by the filter and their product is inversely transformed by F1F^{-1}.
A bank of filters is used with different r0r_{0} and θ0\theta_{0} in order to enhance features of the image of different sizes and orientations. For each image, we use filters consisting of the combinations of several characteristic radius r0r_{0} exponentially distributed from 252^{-5} to 292^{-9} in pixel space, and 6 characteristic orientations θ0\theta_{0} (0, [π/2+kπ/6[-\pi/2+k\cdot\pi/6 , k=0,±1,±2k=0,\pm 1,\pm 2]), distributed around the main direction of the ultrasound beam (downward). The filters and the corresponding filtered images were marked by the index ii.
At each point of the imaging field, the real and imaginary parts of the filtered images are combined to form a metric of the phase symmetry (PS):

PS=i(ei|oi|)Tniei2+oi2+ε,PS=\frac{{\sum\nolimits_{i}{\left\lfloor{({e_{i}}-\left|{{o_{i}}}\right|)-T_{n}}\right\rfloor}}}{{\sum\nolimits_{i}{\sqrt{e_{i}^{2}+o_{i}^{2}}+\varepsilon}}}, (10)

where u\left\lfloor u\right\rfloor denotes max(u,0)max(u,0) and eie_{i} and oio_{i} are the even and odd (real and imaginary) part of the image processed by filter ii, TnT_{n} is a noise threshold (dimensionless) and ϵ\epsilon is included simply to avoid division by zero (ϵ=1010\epsilon~=~10^{-10}). The asymmetrical treatment of even and odd components reflects a polarity choice where only dark-to-light-to-dark features are detected. There are more details about the PS method which have been addressed in previous publications [17, 31].
The threshold, angular and radial standard deviations are chosen empirically to provide images with the least noise; yet retaining the most information. They are maintained identical for all images. The central radial frequency combinations are adjusted to best fit different applications. For the patient imaging of the sagittal lamina view, we used 282^{-8} and 292^{-9}, for simulations, the sagittal spinous process view, and the transversal lamina view, 272^{-7} to 292^{-9}, and for the water bath images we used, 252^{-5} to 292^{-9}. Further, we set the noise threshold Tn=10T_{n}=10 for the water bath images, and Tn=15T_{n}=15 for the rest of images.

II-D Simulation setup

In this study, we simulate two different phantoms using Field II [32]: a single point scatterer phantom, and a vertebra phantom. The vertebra phantom consists of a vertebra body that is embedded in the soft tissue. We use the simulation scenario proposed in [25] for the vertebra phantom. We assume that the bone structure is completely attenuating. Therefore, it shadows point scatterers and surfaces which are not directly visible to the imaging aperture. The 3D geometry of the vertebra body is obtained by CT scanning of a human lumbar vertebra specimen (Fig. 1). By utilizing Matlab and VTK (Kitware, New York, NY, U.S) the 3D vertebra dataset has been segmented into triangular surfaces [33]. Then, equally weighted and spaced point scatterers are generated on the triangulated surfaces with a concentration of 200 scatterers/mm2. The soft tissue is modeled by 1.0×1061.0\times 10^{6} equal amplitude point scatterers that are uniformly distributed in a region of 30×6×2530\times 6\times 25 mm3. The number of scatterers per resolution cell exceeds 10, which is recommended to simulate speckle [34]. The scatterers that are inside the vertebra body are identified and removed from the phantom. The image of the shadowed surfaces and point scatterers are modified by introducing a binary apodization-based shadowing model [25]. This model is applied to Field II in order to make an image of the vertebra phantom.
We simulate images employing a linear array with 128 elements and a center frequency of 5 MHz (f0f_{0}) with 60 percent 6-6 dB fractional bandwidth. The array’s elevation focus is 19 mm, and its pitch equals 0.308 mm. The maximum accessible aperture size for this array transducer is 38.70 mm (MM = 128). The array is excited by 1.5 periods of a square wave at the center frequency of the array. In all simulations, a beam density of 1 beam per element, a fixed transmit focus, and dynamic receive focusing is used. In addition, the f number in the transmit is set to FNTX = 2.8, while the receive f number is set to FNRX = 2.5 for the point scatterer phantom, and FNRX = 1.5 for the vertebra phantom. We select a large FNRX for the point scatterer phantom imaging scenario in order to achieve a wide enough beam width to ease further analysis. The transmit focal depth is set to 15 mm unless otherwise specified. The channel data are acquired for each scan line with a sampling frequency of 100 MHz. For all beamformers after applying delays the channel data are down-sampled to 20 MHz. We computed the analytic signals by applying the Hilbert transform to the channel data. Consequently, in the DAS approach the delayed received channel data are summed up for each scan line, without any apodization, whereas for MV-based beamformers the optimal aperture weights are estimated for each time sample before summation. In the adaptive approaches, we use diagonal loading with Δ=5%\Delta~=~5\% in all simulations.

Refer to caption
Figure 1: (a) An illustration of the vertebra phantom, (b) 3D model constructed from the CT dataset and projection of the selected slices, (c) CT image of slice 1 and its corresponding surface profile, and (d) CT image of slice 2 and its corresponding surface profile.

II-E Experimental setup

We have 2 different experimental cases: registration of a single vertebra, and imaging the spine of a volunteer. In the first experiment we use a human lumbar vertebra specimen (L3) and align the 3D-CT dataset to the 3D-US one. Thus, we secure the vertebra specimen in a rigid holder and glue 4 small plastic balls (fiducials) with a diameter of 2 mm on the vertebra body; two on the spinous process (top) and two on the lamina. Positions of these fiducials are illustrated in Fig. 1(a).
The 3D US volume is constructed from 2D US slices acquired from imaging the vertebra specimen in a water bath, and by moving the probe using a 2D robot in the elevation direction by a step of 0.5 mm [Fig. 1(a)]. The constructed 3D-US volume consists of 512×512×61512\times 512\times 61 voxels with a dimension of 0.077 mm×\times0.077 mm×\times0.5 mm. Subsequently a CT dataset of the vertebra specimen is prepared using a high-resolution CT imager (Siemens, Somantom Definition Flash). This results in a CT volume of 512×512×374512\times 512\times 374 voxels with a resolution of (0.19 mm×\times0.19 mm×\times0.3 mm). For registration, the coordinates of the fiducials’ tip are manually selected both in US and CT datasets. A landmark-based rigid registration algorithm is used to transform the CT dataset in order to match the 3D-US volume. The CT slices are resampled to the in-plane US resolution. Since CT-US registration is performed, the bone iso-surfaces are extracted from the CT volume employing the Marching cubes algorithm in VTK [33]. This is expected to match the ones in US and can be used as the gold standard (GS) reference. An empirically chosen thresholding value of -524 Hounsfield unit (HU) is used to extract the surface profile from the CT slices. We measure the registration accuracy by calculating the fiducial registration error (FRE) [35].
To compare our images with the gold standard CT surface profile, a signed distance distribution of the US intensity values is computed [36]. First, US images are mapped to their corresponding CT image, and the normal distance of non-zero intensity pixels are computed with respect to the extracted GS profile. The pixels located inside the GS profile have positive and the pixels located outside the GS profile have negative distance values. This produces a set of intensity/ signed distance pairs. The high intensity values around the zero distance indicates the bone localization accuracy, and the concentration of the intensity values in positive/negative distances shows the noise level inside/outside of the bone surface.
In the in-vivo experiments, we use a male healthy volunteer. His lumbar vertebra (L2) is scanned in three different planes: sagittal plane of the spinous process, and sagittal and transversal planes of the lamina. For scanning the spinous process, we use a 10 mm stand-off (SonarAid, Wolhusen, Lucerne, Switzerland) in order to improve the matching between probe and skin. The scans were preformed after obtaining signed consent from the volunteer.
In the experimental studies, channel data are acquired using a SonixMDP scanner (Ultrasonix medical corporation, Vancouver, British Columbia, Canada), along with a linear array transducer (L14-5/38) with 128 elements, centre frequency of 5 MHz, and pitch of 0.308 mm. We use 256 imaging beams which are transmitted with FNTX = 2.8, and received with FNRX = 1.5. Further, the receive aperture walks with the transmit aperture, meaning that the active receive elements are centered on the transmit beam axes. The SonixDAQ (Ultrasonix medical corporation, Vancouver, British Columbia, Canada) is used to capture the channel data. This module allows us to store RF data acquired from 128 elements simultaneously. For the beamforming, the channel data related to each beam is first determined and delayed. Then, the ESMV beamforming method is applied to construct images of interest. As for the simulations, Δ=5%\Delta~=~5\% is used for the diagonal loading purpose. Further, after construction of the images a 2D median filter with a window size of 3×33\times 3 is applied to smooth the images.

III Results

III-A Effects of the largest eigenvalue on image of a point scatterer:

Fig. 2 demonstrates the effect of using only the largest eigenvalue on the image of a point scatterer. Fig. 2(a) shows the DAS image of the simulated point scatterer. Fig. 2(b) presents the ESMV image when only the largest eigenvalue is used for estimating the signal subspace (𝐄𝐬\bf{E}_{s}). In comparison with Fig. 2(a), the point scatterer is defined with higher resolution and the sidelobe level is decreased. In Fig. 2(c), it is assumed that all eigenvalues contribute in the signal subspace except the largest one (λ1\lambda_{1}). In this scenario, the image of the point scatterer is completely distorted. In Fig. 2(d) the beam profiles corresponding to Figs. 2(a) - (c) are compared. In this figure it can be seen that using λ1\lambda_{1} in the ESMV beamformer results in a -12 dB beamwidth of 0.35 mm. This value is about 0.8 mm for DAS. Ideally, the sidelobe levels are decreased from -30 dB in DAS to -95 dB for ESMV. Also, it can be seen that when λ1\lambda_{1} is excluded a major part of the mainlobe between 0 and -20 dB is removed [Fig. 2(d)].

Refer to caption
Figure 2: Simulated point scatterer using a 128 element, 5 MHz transducer. The point scatterer is located at the transmit focal depth which is 15 mm. Dynamic focusing is used for the received beams. (a) DAS, (b) ESMV (just the largest eigenvalue), (c) ESMV (excluding the largest eigenvalue), (d) two-way beam profiles corresponding to the images in (a)-(c). The dynamic range is 50 dB. L=M/2L=M/2, K=0K=0 are used for (b)-(c). In (a)-(c) image dimensions are 3 mm×\times5 mm (depth×\timeslateral).

III-B Simulated vertebra phantom:

Fig. 3 shows simulated images of the vertebra phantom introduced in the simulation setup section and its corresponding phase symmetry images for different beamformers. In this imaging scenario, the transmit focal depth is 15 mm. Fig. 3(a) shows the DAS image of the vertebra phantom. Figs. 3(b) - (d) present ESMV images for different eigenvalue threshold values (β\beta). In Fig. 3(d), β=0.001%\beta=0.001\% is selected to ensure that just the largest eigenvalue is used. It can be seen that by decreasing β\beta the speckle pattern in the neighboring region of the vertebra body is distorted, and for β=0.001%\beta=0.001\% it is almost removed, especially between the depths of 25 mm and 32 mm. This effect can be partly seen around the spinous process (top of the vertebra) at a depth of 15 mm. Figs. 3(e) - (h) show PS images related to Figs 3(a) - (d). It can be seen that by decreasing β\beta the bone boundaries become sharper. In Fig. 3(h), we observe that a larger segment of the lamina is detected between a depth of 26 mm and 29 mm in box A, and between a depth of 23 mm and 26 mm in box B in comparison with Fig. 3(e).

Refer to caption
Figure 3: Simulated vertebra phantom using a 128 element, 5 MHz transducer. The transmit focal depth is 15 mm and dynamic focusing is used for the received beams. (a) DAS (US), (b) ESMV (US, β=10%\beta=10\%), (c) ESMV (US, β=1%\beta=1\%), (d) ESMV (US, β=0.001%\beta=0.001\%) (e) DAS (PS), (f) ESMV (PS, β=10%\beta=10\%), (g) ESMV (PS, β=1%\beta=1\%), and (h) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 60 dB for (a)-(d). L=M/2L=M/2, K=10K=10 are used for (b)-(d).

III-C Registration of a vertebra:

Figs. 4 and  5 show the CT gold standard surface profile overlaid on the ultrasound images for the two different vertebra slices of Fig. 1(b). In this registration setup, the FRE value is calculated as 0.13 mm. Figs. 4(a) and (b) show the DAS and ESMV images of slice 1. The CT profile matches well on outer boundary of the vertebra in both images. In the DAS image [Fig. 4(a)] the sidelobe noise is clearly observed around the spinous process between a depth of 15 mm and 20 mm. Also, the sidewall boundaries are stretched due to the shadowing effect [25], whereas in the ESMV image the sidelobe noise is decreased and the boundaries are enhanced. In Figs. 4(c) and (d) a deviation of the surface from the gold standard surface is observed, particularly on spinous process (top of the vertebra). In Fig. 4(c) the curvature of spinous process profile has been distorted, whereas the anatomy of the vertebra is preserved reasonably well in Fig. 4(d). Further, the acoustical noise observed inside the bone, between a depth of 35 mm and 40 mm, is reduced in Fig. 4(d) than that of Fig. 4(c).

Refer to caption
Figure 4: Registration of the CT image to ultrasound image slice 1 for DAS and ESMV images and their corresponding PS images, (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\% ), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 70 dB for (a) and (b). L=M/2,K=0L=M/2,K=0 are assumed for (b).

Figs. 5(a) and (b) show the DAS and ESMV images of slice 2, and Figs. 5(c) and (d) demonstrate their corresponding PS images. Comparing the DAS and ESMV based US images, the bone edges are improved in Fig. 5(b) in comparison with Fig. 5(a). Further, comparing to the gold standard surface profile, in Fig. 5(d) the anatomy of the spinous process is preserved whereas it is distorted in Fig. 5(c). Also, in Fig. 5(d), the detected surface is sharper in comparison with Fig. 5(c).

Refer to caption
Figure 5: Registration of the CT image to ultrasound image slice 2 for DAS and ESMV images and their corresponding PS images, (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\% ), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 70 dB for (a) and (b). L=M/2,K=0L=M/2,K=0 are assumed for (b).

Fig. 6 presents the distribution of intensity values and their corresponding signed distances for the images in Fig. 4. Each graph is divided into three regions: A , B, and C. The region A indicates the intensity distribution around the bone surface, defined between -0.5 mm and 2.1 mm in US images, and between 0.1 mm and 2.1 mm in PS images. Both US and PS images corresponding to the ESMV beamforming technique have less noise level in the regions B and C (Table. I), and a narrower distribution in the region A in comparison with those of the DAS beamforming technique. Comparing the PS images, the mean surface localization error, calculated in region A, is 0.90 mm (STD =0.85 mm ) for DAS and 0.79 mm (STD = 0.77 mm) for ESMV.

Refer to caption
Figure 6: Signed distance plots obtained from Fig. 4. (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\% ), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%).

Fig. 7 presents the distribution of intensity values with their corresponding signed distance for the images in Fig. 5. The regions A, B, and C are defined the same as in Fig. 6. The noise levels in the regions B and C of the ESMV image are almost 16%\% and 13%\% of that in the DAS image. Comparing Figs. 6(c) and (d), we observe that the concentration of intensity values are much less in regions B, and C in the ESMV image (PS) than in the DAS image (PS). The mean localization error is 0.97 mm (STD =0.57 mm) for DAS and 0.95 mm (STD=0.45 mm) for ESMV.

Refer to caption
Figure 7: Signed distance plots obtained from Fig. 5. (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\% ), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%).

Table I shows quantitative results for the image quality assessment of the vertebra slices in Figs. 4 and 5. This table shows the bone surface localization errors and the noise level in the US and PS images obtained from the DAS and ESMV beamforming techniques.

In Fig. 8, we present two different image lines of the US and PS images presented in Fig. 4. These lines are marked in Fig. 4(c). In Figs. 8(a) - (d) the location of the bone surface obtained from the gold standard reference is marked by vertical dash-dot lines. In Fig. 8(a), there is a peak bias of 1.12 mm for both DAS and ESMV, which is measured relative to the gold standard reference. The mean intensity of acoustical noise, measured between a depth of 30 mm and 40 mm, is decreased from 69.01 in DAS to 14.33 in ESMV . The profile widths at an intensity value of 200 are 1.03 mm for DAS and 0.73 mm for ESMV. Fig. 8(b) shows a horizontal image line at Depth\rm Depth = 29.80 mm. The peaks at xldx_{ld} \approx 18.30 mm and xldx_{ld} \approx 24 mm indicate the left-hand and right-hand sidewalls at the corresponding depth. The profile width at a pixel intensity of 150 is 0.75 mm for ESMV and 1.39 mm for DAS for the right-hand sidewall. Fig. 8(c) presents the PS scan-lines corresponding to Fig. 8(a). In this figure, the profile width measured at an intensity value of 200 is 0.44 mm for DAS, and 0.30 mm for ESMV. Further, the intensity level drops by 129 for DAS and by 218 for ESMV between a depth of 17.45 mm and 18 mm. Also, the mean noise level is 24.50 for DAS and 4.67 for ESMV between a depth of 30 mm and 40 mm. In Fig. 8(d), the profile width at an intensity level of 100 is 0.51 mm for DAS and 0.34 mm for ESMV, measured around the right-hand sidewall.

TABLE I: Quantitative results for the image quality assessment of the vertebra slices in Figs. 4 and 5. The mean localization error is calculated in region A. Regions A, B, and C are presented in Figs. 6 and 7

. Slice Mean localization error [mm] STD [mm] Mean intensity B Mean intensity C DAS ESMV DAS ESMV DAS ESMV DAS ESMV  US 1 0.70 0.66 0.72 0.65 27.18 4.71 92.41 16.81 2 0.90 0.79 0.85 0.77 63.06 10.17 125.52 15.80  PS 1 0.94 0.84 0.53 0.42 32.20 6.60 3.06 1.24 2 0.97 0.95 0.57 0.45 32.24 3.93 5.16 1.88 STD = standard deviation

Refer to caption
Figure 8: Comparison of image lines in Figure 4 for the DAS and ESMV images, (a) US images-xldx_{ld} = 13.70 mm, (b)US images-xldx_{ld} = 21 mm, (c)PS-images depth = 32.10 mm, and (d)PS-images depth = 36.60 mm.

Fig. 9 presents two different image lines of the US and PS images in Fig. 5. These lines are marked in Fig. 5(c). In Fig. 9(a), the mean noise level, measured between a depth of 30 mm and 40 mm, is decreased from 69.01 in DAS to 14.33 in ESMV. Fig. 9(b) shows a horizontal image line at Depth\rm Depth = 31 mm. In this figure, the peaks at xldx_{ld} \approx 19.1 mm and xldx_{ld} \approx 23.5 mm indicate the left-hand and right-hand sidewalls at the corresponding depth. The signal sensitivity at the right-hand and left-hand sidewalls are 126 and 136 for ESMV, and 55 and 81 for DAS. In Fig. 9(c), the profile width measured at an intensity value of 150 is 0.59 mm for DAS and 0.29 mm for ESMV. The mean noise levels measured between a depth of 17.45 mm and 18 mm are 20.35 and 4.62 for DAS and ESMV. In Fig. 8(d), the profile width at an intensity level of 50 is 0.71 m for DAS and 0.45 mm for ESMV for the left-hand sidewall.

Refer to caption
Figure 9: Comparison of image lines in Figure 5 for the DAS and ESMV images, (a)US-images xldx_{ld} = 14.32 mm, (b)US-images xldx_{ld} = 21.80 mm, (c)PS-images depth = 32.10 mm, and (d)PS-images depth = 36.60 mm.

III-D In-vivo images:

Figs. 10 - 12 demonstrate a qualitative comparison between PS images obtained from DAS and ESMV beamformers. Fig. 10 shows images of a lamina in the sagittal direction. Fig. 10(a) corresponds to the DAS image and Fig. 10(b) demonstrates the ESMV image for β=0.001%\beta=0.001\%. It can be seen that in the ESMV image,the amount of the speckle around the bone surface is reduced. Figs. 10(c) and (d) show PS images obtained from Figs. 10(a) and (b). It is observed that the ESMV beamformer improves the bone surface and results in a thinner definition of the bone boundary. Also on the left-hand side of the DAS image (marked with a white arrow) some unwanted features are observed, which have been removed in Fig. 10(d).

Refer to caption
Figure 10: Ultrasound and PS post-processed images of lamina. (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\%), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 50 dB and L=M/2,K=2L=M/2,K=2 are used for (a) and (b).

Figs. 11 shows sagittal plane images of spinous process. Fig. 11(a) shows the DAS image. Fig. 11(b) demonstrate the ESMV image with β=0.001%\beta=0.001\%. Comparing with Fig. 10(a), in this image the speckle around the bone surface is reduced while the structure of the bone is preserved. Fig. 11(c) shows the PS image obtained from the DAS image. In this image the bone surface is smeared out and the boundaries are not well delineated, whereas in Fig. 11(d) the bone surface is reasonably well isolated from the connective tissue on the top of the surface. In Fig. 10(c), the bone boundary, on both side of the spinous process marked with white arrows, is thick and unclear. In comparison, in Fig. 11(d) the bone boundary is sharper and a prolongation of the surface is observed. In a similar manner in Fig. 11(d) the sharpness of the bone surface is increased for smaller β\beta, and the surface is somewhat better isolated from the connective tissue in comparison with Fig. 11(c).

Refer to caption
Figure 11: Ultrasound and PS post-processed images of spinous process in sagittal direction for DAS and ESMV beamformers. (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\%), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 40 dB and L=M/2,K=2L=M/2,K=2 are used for (a) and (b).

Fig. 12 shows an image of the lamina in the transversal direction. Comparing the US images, we observe a superior isolation of the bone surface from surrounding soft tissue in the ESMV image. Comparing the PS images, in Fig. 12(d), we observe a delineation of the facet joint on left -hand side, and the lamina boundary on the right-hand side. Further, in Fig. 12(d), an improved isolation between the facet joint and the lamina, and a sharper definition of the bone boundaries is observed.

Refer to caption
Figure 12: Ultrasound and PS post-processed images of the spinous process in transversal direction. (a) DAS (US), (b) ESMV (US, β=0.001%\beta=0.001\%), (c) DAS (PS), and (d) ESMV (PS, β=0.001%\beta=0.001\%). The dynamic range is 50 dB and L=M/2,K=2L=M/2,K=2 are used for (a) and (b).

IV Discussion

There is a potential for the ESMV beamformer to enhance the bone edges in US images, but the performance of this beamformer depends on the signal subspace estimation. From Figs. 3(b) - (d), we observe that by using a small threshold value the bone structure is preserved while the speckle in its neighborhood is reduced. This effect which has been discussed in [27] can give rise to images with enhanced edges but distorted speckle patterns [Figs. 3(a) - (d)]. A very small thresholding value results in a rank-1 signal subspace [Fig. 3(d)], i.e. just the largest eigenvalue is used for the signal subspace estimation in (7). Thus, since detection of edges is the main purpose, regardless of the speckle pattern, a rank-1 signal subspace can enhance the bone edges images obtained from the ESMV beamformer [Figs. 10(b) - 12(b)]. This is beneficial for post-processing techniques, e.g. the phase symmetry method, for extracting or locating the bone surfaces.
In the simulated images, Fig. 3, because of the specular reflection, some parts of the vertebra sidewalls are missed. In Fig. 3(a), the coherent scattering from the perpendicular surfaces to the beams result in echoes with the higher intensities, e.g., the the spinous process top, and parts of the lamina located at xld=±10x_{ld}={\pm}10 mm. In this simulation setup, for each triangle, the scatterers are equally spaced and located in-plane, and all have equal scattering strengths. That is, roughness effects are not considered in these images. However, the angle between the triangular surface elements can partly introduce the roughness to our simulation model.
From Fig. 3(h), and Figs. 10(d) - 12(d) we observe that the bone surfaces which are extracted from the ESMV are sharper, the bone boundaries are thinner, and they are reasonably well isolated from the connective tissue in comparison with the DAS one. Also, this setup shows more details of the vertebra geometry, e.g. in Figs. 4(d) - 5(d) the spinous process geometry is well preserved ( at top of the images) .
The registration with CT-contours, shown in Figs. 4 and 5, suggests that the ultrasound bone response appears within the CT-contours. The PS filtered bone surface is delineated at the maximum of the ultrasound bone response, which places it even further inside the CT-surface. This behavior of the PS-filter is expected from its mathematical formulation as it identifies the maximum of the response in the signal rather than its rising side. The other reason for the observed bias is due to the registration error as pinpointing the balls’ tip accurately in the US images was more difficult than in the CT dataset. In this study the PS parameters are assigned empirically, and finding an optimal setup for the log-Gabor filter may be a challenge. In  [36], an automated procedure for selecting the filter parameters has been investigated, which can ease the filter tuning procedure.
From Fig. 3, Fig. 4, and Table I, we observe that the surface localization error in both DAS and ESMV are in the same order of magnitude, but narrower distribution of the intensity values in region A indicates shaper boundaries in the ESMV images. Further, the noise level is much lower inside / outside of the bone in the ESMV images.
The post-processed images in Figs. 10 - 12, demonstrate that there is a potential for the phase symmetry technique to reasonably well exploit the spinal structure from US images. This can result in an enhanced 3D reconstruction of the spinal anatomy, which facilitates level detection procedure in minimally invasive spinal surgeries [12], and registration of preoperative CT or MR images to intraoperative US in neuro-navigation surgeries [2]. Furthermore, the superior separation of the bone surface from the connective tissues achieved in Fig. 11(d), can ease the model-based automated segmentation of the spine anatomy.
The use of direction-dependent thresholding as designed in  [17], was not implemented as preservation of minute anatomical structures was considered more important than further noise removal. Further, the automatic adaptive parameterization suggested in [36] was not tested for this work. Manual tuning of the different parameters provided satisfying results. The automated approach will be implemented in our further work.

V Conclusions

We have explored the potential of a rank-1 ESMV beamformer, together with the phase symmetry post-processing method to enhance the spinal anatomy in ultrasound images. The suggested beamformer is independent of the thresholding factor, and its complexity is in the same order as for minimum variance beamformer. This beamforming setup can locate the spinal structure reasonably well while reducing the speckle from the surrounding tissue. Therefore, the phase symmetry filtering of these images can result in an improved definition of the boundaries and enhanced separation of the spinal anatomy from the neighboring connective tissues in comparison with the DAS technique. This shows that beamforming which is optimized for good visual appearance is not always optimal for feature extraction. This is therefore one of the first examples which demonstrates that it can be beneficial to do beamforming in a way which does not give the best visual appearance, but rather one that gives the best feature detection. If good optimization criteria can be defined, then future work could take this one step further by actually doing a joint optimization of the two operations in order to improve feature detection.

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